any DRM that fully complies with DRMAA spec?
Dear all, I'm writing a module for queueing jobs as an addition to a web interface for bioinformatics software. I'm using Perl DRMAAc module and SGE 6.0u4 I encountered the same problem that was reported here http://gridengine. sunsource.net/issues/show_bug.cgi?id=1485 Is there any DRM software that fully implements/complies with DRMAA spec? Has the Perl DRMAA module been tested with Condor? Regards, Martin -- Martín Sarachu msarachu@biol.unlp.edu.ar EMBnet Argentina http://www.ar.embnet.org
SGE is fully DRMAA compliant. The bug you noted is something that the spec states as optional. We have it filed as a bug because many users, such as yourself, see it that way (as opposed to an RFE). There is no other DRMS that I know of that has a more complete DRMAA implementation. We recognise that issue 1485 is important for many users, and we're actively working on a clean way to fix it. Daniel Martín Sarachu wrote:
Dear all,
I'm writing a module for queueing jobs as an addition to a web interface for bioinformatics software. I'm using Perl DRMAAc module and SGE 6.0u4 I encountered the same problem that was reported here http://gridengine. sunsource.net/issues/show_bug.cgi?id=1485 Is there any DRM software that fully implements/complies with DRMAA spec? Has the Perl DRMAA module been tested with Condor?
Regards,
Martin
-- *************************************************** * Daniel Templeton ERGB01 x60220 * * Staff Engineer, Sun N1 Grid Engine * *************************************************** * "Roads? Where we're going we don't need roads." * * -Dr. Emmett Brown * * Back to the Future (1985) * ***************************************************
thanks for your answer Daniel Quoting Daniel Templeton <Dan.Templeton@Sun.COM>:
SGE is fully DRMAA compliant. The bug you noted is something that the spec states as optional. We have it filed as a bug because many users, such as yourself, see it that way (as opposed to an RFE).
There is no other DRMS that I know of that has a more complete DRMAA implementation. We recognise that issue 1485 is important for many users, and we're actively working on a clean way to fix it.
Daniel
Martín Sarachu wrote:
Dear all,
I'm writing a module for queueing jobs as an addition to a web interface for
bioinformatics software. I'm using Perl DRMAAc module and SGE 6.0u4 I encountered the same problem that was reported here http://gridengine. sunsource.net/issues/show_bug.cgi?id=1485 Is there any DRM software that fully implements/complies with DRMAA spec? Has the Perl DRMAA module been tested with Condor?
Regards,
Martin
-- *************************************************** * Daniel Templeton ERGB01 x60220 * * Staff Engineer, Sun N1 Grid Engine * *************************************************** * "Roads? Where we're going we don't need roads." * * -Dr. Emmett Brown * * Back to the Future (1985) * ***************************************************
-- Martín Sarachu msarachu@biol.unlp.edu.ar EMBnet Argentina http://www.ar.embnet.org
Martin, When I developed Perl module I started to get it to work with Condor. I ran into a wall when I discovered that Condor only provided a static library for DRMAA. I'm not sure if this is still the case, they had intent of fixing it. When/if it gets fixed I doubt I will be able to stand up a Condor test system for testing/fixing the module to work for Condor. I think it would probably only require one or two lines of change to the makefile but without a test system or the time to stand one up I doubt I'll get to it. HTH Tim ----- Original Message ----- From: "Martín Sarachu" <msarachu@biol.unlp.edu.ar> To: "Daniel Templeton" <Dan.Templeton@Sun.COM> Cc: <drmaa-wg@ggf.org> Sent: Monday, August 08, 2005 7:16 AM Subject: Re: [drmaa-wg] any DRM that fully complies with DRMAA spec? thanks for your answer Daniel Quoting Daniel Templeton <Dan.Templeton@Sun.COM>:
SGE is fully DRMAA compliant. The bug you noted is something that the spec states as optional. We have it filed as a bug because many users, such as yourself, see it that way (as opposed to an RFE).
There is no other DRMS that I know of that has a more complete DRMAA implementation. We recognise that issue 1485 is important for many users, and we're actively working on a clean way to fix it.
Daniel
Martín Sarachu wrote:
Dear all,
I'm writing a module for queueing jobs as an addition to a web interface for
bioinformatics software. I'm using Perl DRMAAc module and SGE 6.0u4 I encountered the same problem that was reported here http://gridengine. sunsource.net/issues/show_bug.cgi?id=1485 Is there any DRM software that fully implements/complies with DRMAA spec? Has the Perl DRMAA module been tested with Condor?
Regards,
Martin
-- *************************************************** * Daniel Templeton ERGB01 x60220 * * Staff Engineer, Sun N1 Grid Engine * *************************************************** * "Roads? Where we're going we don't need roads." * * -Dr. Emmett Brown * * Back to the Future (1985) * ***************************************************
-- Martín Sarachu msarachu@biol.unlp.edu.ar EMBnet Argentina http://www.ar.embnet.org
participants (3)
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Daniel Templeton -
Martín Sarachu -
Tim Harsch